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APC gene

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The APC gene, or Adenomatous Polyposis Coli gene, is a tumor suppressor gene located on chromosome 5. It plays a crucial role in regulating cell growth and adhesion, and its mutations are primarily associated with familial adenomatous polyposis (FAP) and colorectal cancer development.
lightbulbAbout this topic
The APC gene, or Adenomatous Polyposis Coli gene, is a tumor suppressor gene located on chromosome 5. It plays a crucial role in regulating cell growth and adhesion, and its mutations are primarily associated with familial adenomatous polyposis (FAP) and colorectal cancer development.

Key research themes

1. How do APC gene mutations, including germline, somatic mosaicism, and structural rearrangements, contribute to colorectal polyposis and cancer phenotypes?

This theme addresses the identification, characterization, and clinical implications of diverse pathogenic variants in the APC gene leading to familial adenomatous polyposis (FAP) and related colorectal cancer phenotypes. It covers germline mutations, somatic mosaicism, large genomic rearrangements, and deep intronic variants, emphasizing their genotype-phenotype correlations which matter for early diagnosis, genetic counseling, and tailoring clinical management.

Key finding: This study found somatic mosaicism of the APC gene in 50% of sporadic adenomatous polyposis patients lacking germline APC or MUTYH mutations, demonstrating that somatic mosaicism is a significant and underrecognized cause of... Read more
Key finding: The paper identified a novel complex pathogenic germline rearrangement deleting exon 5 of APC, linked to atypical FAP clinical presentations including variable extracolonic tumors, thus highlighting the importance of nonpoint... Read more
Key finding: Using whole genome sequencing and RNA-based assays, this work discovered a deep intronic APC variant causing aberrant exonization and nonsense-mediated decay, proving that deep intronic mutations are an important source of... Read more
Key finding: This review synthesizes state-of-the-art approaches for detecting diverse disease-causing APC variants including point mutations, large rearrangements, promoter variants, and epigenetic modifications, emphasizing that a... Read more
Key finding: The study identified a heterozygous 16-bp deletion at the splice donor site within APC intron 10 causing complete exon 10 skipping, which segregates with classical FAP in a large family, demonstrating how splice-site... Read more

2. What is the cellular context-dependent impact of APC gene mutations on tumor behavior and gene regulatory networks?

This research area investigates how APC mutations exert different functional consequences depending on cell type, lineage, and epigenetic context, influencing tumor progression, gene expression profiles, and cellular phenotypes. This has relevance for understanding tissue-specific tumorigenesis mechanisms, cancer heterogeneity, and therapeutic targeting.

Key finding: Using reprogrammed colon tumor cells from an Apc mutant mouse model, the study demonstrated that APC mutations affect gene expression differently between intestinal lineages and pluripotent-like cells, with mutant cells... Read more

3. How do APOBEC family gene variants and expression influence cancer mutagenesis and disease susceptibility, including breast and viral-related cancers?

This theme focuses on the roles of APOBEC cytidine deaminases in mediating mutational processes in cancers, how genetic polymorphisms and copy number variants in APOBEC genes (notably APOBEC3B and APOBEC3A/B deletion) correlate with cancer risk, progression, and hypermutation phenotypes, as well as their interplay with viral infections.

Key finding: This integrative analysis revealed that APOBEC3B and APOBEC3C are differentially expressed between estrogen receptor-positive and -negative breast cancers and APOBEC3B expression strongly correlates with mutational burden,... Read more
Key finding: The paper identified a novel complex pathogenic germline rearrangement deleting exon 5 of APC, linked to atypical FAP clinical presentations including variable extracolonic tumors, thus highlighting the importance of nonpoint... Read more
Key finding: Investigation of APOBEC3G genetic variants in a West African cohort showed specific alleles and haplotypes that conferred protective effects against HIV-1 infection, demonstrating the importance of host APOBEC3 polymorphisms... Read more
Key finding: Large-scale analysis found that despite APOBEC3B deletion polymorphism being associated with increased breast cancer risk in some populations, it does not significantly correlate with metastasis-free survival or clinical... Read more
Key finding: This study demonstrated APOBEC3A/B deletion polymorphism acts synergistically with MMTV-like viral presence to predispose to early-onset breast cancer, identifying active APOBEC3-induced mutagenesis in MMTV sequences and... Read more

All papers in APC gene

Algunos casos de cáncer presentan una clara causa genética bien definida. Para demostrar la existencia, de forma objetiva, de un cáncer hereditario es necesario identificar la mutación causante en un gen concreto de la línea germinal. La... more
The anaphase promoting complex 7 (AtAPC7) is an APC/C subunit expressed in different organs of Arabidopsis thaliana and conserved among eukaryotes. A variant of the complete APC7 protein, containing its C‐terminal region (named APC‐CT),... more
Breast fibromatosis is a benign fibroblastic proliferation accounting for less than 0.2% of breast tumors. It presents sporadically or as a manifestation of familial adenomatous polyposis (FAP). Fibromatosis in FAP may develop in patients... more
Familial adenomatous polyposis (FAP) is an autosomal dominant hereditary syndrome characterised by the development of hundreds to thousands of adenomatous colonic polyps during the second decade of life. FAP is caused by germ line... more
Breast fibromatosis is a benign fibroblastic proliferation accounting for less than 0.2% of breast tumors. It presents sporadically or as a manifestation of familial adenomatous polyposis (FAP). Fibromatosis in FAP may develop in patients... more
Algunos casos de cáncer presentan una clara causa genética bien definida. Para demostrar la existencia, de forma objetiva, de un cáncer hereditario es necesario identificar la mutación causante en un gen concreto de la línea germinal. La... more
Background Germ-line mutations in DNA mismatch-repair genes (MSH2, MLH1, PMS1, PMS2, and MSH6) cause susceptibility to hereditary nonpolyposis colorectal cancer. We assessed the prevalence of MSH2 and MLH1 mutations in families suspected... more