Key research themes
1. How do APC gene mutations, including germline, somatic mosaicism, and structural rearrangements, contribute to colorectal polyposis and cancer phenotypes?
This theme addresses the identification, characterization, and clinical implications of diverse pathogenic variants in the APC gene leading to familial adenomatous polyposis (FAP) and related colorectal cancer phenotypes. It covers germline mutations, somatic mosaicism, large genomic rearrangements, and deep intronic variants, emphasizing their genotype-phenotype correlations which matter for early diagnosis, genetic counseling, and tailoring clinical management.
2. What is the cellular context-dependent impact of APC gene mutations on tumor behavior and gene regulatory networks?
This research area investigates how APC mutations exert different functional consequences depending on cell type, lineage, and epigenetic context, influencing tumor progression, gene expression profiles, and cellular phenotypes. This has relevance for understanding tissue-specific tumorigenesis mechanisms, cancer heterogeneity, and therapeutic targeting.
3. How do APOBEC family gene variants and expression influence cancer mutagenesis and disease susceptibility, including breast and viral-related cancers?
This theme focuses on the roles of APOBEC cytidine deaminases in mediating mutational processes in cancers, how genetic polymorphisms and copy number variants in APOBEC genes (notably APOBEC3B and APOBEC3A/B deletion) correlate with cancer risk, progression, and hypermutation phenotypes, as well as their interplay with viral infections.