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Centromere Biology

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lightbulbAbout this topic
Centromere biology is the study of the structure, function, and dynamics of centromeres, the specialized regions of chromosomes that ensure proper segregation during cell division. This field encompasses the molecular mechanisms of centromere formation, maintenance, and the role of centromeric proteins in chromosome behavior.
lightbulbAbout this topic
Centromere biology is the study of the structure, function, and dynamics of centromeres, the specialized regions of chromosomes that ensure proper segregation during cell division. This field encompasses the molecular mechanisms of centromere formation, maintenance, and the role of centromeric proteins in chromosome behavior.

Key research themes

1. How does epigenetic regulation mediate centromere identity, plasticity, and function despite DNA sequence variability?

This theme investigates the epigenetic mechanisms that define and preserve centromere function and identity across species despite rapid evolution and wide variability in centromeric DNA sequences. It addresses the role of the centromere-specific histone variant CENP-A (also known as CenH3), associated proteins of the constitutive centromere-associated network (CCAN), chromatin structure dynamics, and DNA methylation patterns in maintaining centromere stability and kinetochore assembly. Understanding these epigenetic contributions is fundamental to centromere biology since many functional centromeres form on non-repetitive DNA or neocentromeres, underscoring the minimal or non-essential role of specific DNA sequences in centromere identity.

Key finding: Demonstrates that human centromere identity is determined primarily by epigenetic features rather than DNA sequence, with CENP-A nucleosomes recruiting CCAN proteins to specify centromeres. Establishes that satellite DNA and... Read more
Key finding: Provides comprehensive evidence that centromere plasticity and tolerance to diverse stressors (e.g., DNA damage, replication stress, spindle forces) are enabled via epigenetic regulation involving CENP-A chromatin... Read more
Key finding: Details the paradox of centromere conservation in mitotic function versus rapid DNA sequence evolution, highlighting epigenetic specification by CENP-A as a key mechanism that allows centromere plasticity and diversity in... Read more
Key finding: Identifies the functional role of CENP-A and CCAN proteins (notably CENP-C and CENP-T/W) in maintaining the integrity of α-satellite DNA repeats by suppressing elevated sister chromatid exchange events at centromeres,... Read more

2. What molecular structural insights explain kinetochore assembly and centromere-chromatin interactions in humans?

This theme focuses on recent high-resolution structural biology studies of the constitutive centromere-associated network (CCAN) and its interaction with CENP-A nucleosomes in humans. It explores the molecular architecture of the key CCAN subunits, their arrangement, and how these structures govern kinetochore nucleation and centromere-chromatin specificity. Bridging the gap between epigenetic definition and molecular assembly, elucidating these structures is vital for understanding kinetochore function, centromere maintenance through the cell cycle, and the molecular basis of chromosome segregation fidelity.

Key finding: Presents the cryo-electron microscopy structure of the human 16-subunit CCAN complex outlining its unique subunit organization including the pseudo GTPase CENP-M and the CENP-C motif binding to the CENP-LN complex. Reveals... Read more

3. How do centromere DNA sequences and genome organization evolve, contributing to centromere plasticity and species speciation?

This theme examines the genomic and evolutionary dynamics of centromere DNA sequences, particularly tandem repeats and satellite DNA, their homogenization via recombination and replication processes, and chromosomal rearrangements involving centromeres. It studies inter-species centromere type transitions and spatial genome architecture influencing centromere evolution. These insights illuminate the genetic and structural basis of centromere diversification, contributing to karyotype evolution, genome stability, and speciation.

Key finding: Demonstrates that spatial proximity of centromeres among chromosomes in Candida tropicalis, revealed by 3C-seq, promotes inter-centromeric translocations that likely facilitated the evolutionary transition from homogenized... Read more
Key finding: Describes the discovery and prevalence of satellite-free centromeres within certain Equus species and discusses their fixed status in natural populations, emphasizing that satellite DNA is not required for centromere... Read more
Key finding: Provides experimental evidence in horse cells that chromosomes harboring satellite-free centromeres exhibit equal mitotic segregation fidelity as chromosomes with satellite-rich centromeres under both normal and... Read more
Key finding: Reveals extensive variability in centromere size and organization across closely related legume species, including metapolycentric chromosomes with multiple distinct CenH3 domains. Correlates gene duplication and... Read more

All papers in Centromere Biology

Dynamic localization of the chromosomal passenger complex (CPC) during mitosis is essential for its diverse functions. CPC targeting to centromeres involves interactions between Survivin, Borealin, and the inner centromere protein (CENP... more
Survivin is a key cellular protein thought to function in apoptotic regulation, mitotic progression, or possibly both. In this study, we describe the isolation of two conditional knockouts of the survivin gene in chicken DT40 cells. DT40... more
Despite the fact that the chromosomal passenger complex is well known to regulate kinetochore behavior in mitosis, no functional link has yet been established between the complex and kinetochore structure. In addition, remarkably little... more
Small supernumerary marker chromosomes (SMCs) are present in about 0.05% of the human population. In approximately 30% of SMC carriers (excluding the ~60% SMC derived from one of the acrocentric chromosomes), an abnormal phenotype is... more
status in breast carcinoma is essential for therapy planning. Clinical assays are targeted at protein overexpression (immunohistochemical analysis) or gene amplification (fluorescence in situ hybridization [FISH]). Cases with aberrant... more
Numerous mutations in the human A-type lamin gene (LMNA) cause the premature aging disease, progeria. Some of these are located in the α-helical central rod domain required for the polymerization of the nuclear lamins into higher order... more
Mitotic chromosomes of the freshwater snail Pomacea patula catemacensis were analyzed on gill tissue of specimens from the type locality (Lake Catemaco, Mexico). The diploid number of chromosomes is 2n = 26, including nine metacentric and... more
This paper describes the genomic structure of the human Prostaglandin F receptor gene (FP) with its exon-intron borders and 5' flanking sequences. Furthermore, the location of the gene has been localized to a very small region on... more
Cytogenetic analyses were performed on Hoplias malabaricus (Bloch, 1794) from the Taquari River, Parana River drainage, revealing two sympatric karyomorphs. One karyomorph was characterized by 2n = 40 m/sm and 2n = 39 m/sm chromosomes for... more
Cytogenetic analyses were performed on Hoplias malabaricus (Bloch, 1794) from the Taquari River, Parana River drainage, revealing two sympatric karyomorphs. One karyomorph was characterized by 2n = 40 m/sm and 2n = 39 m/sm chromo- somes... more
We report on two brothers and one maternal cousin with severe mental retardation, microcephaly, short stature, cryp- torchidism, and spastic diplegia. The patients were born to normal and non- consanguineous parents. All other mem- bers... more
The abnormal tumor microenvironment (TME) often dictates the therapeutic response of cancer to chemo-and immuno-therapy. Aberrant expression of pericentromeric satellite repeats has been reported for epithelial cancers, including lung... more
International Rice Genome Sequencing Project* Rice, one of the world's most important food plants, has important syntenic relationships with the other cereal species and is a model plant for the grasses. Here we present a map-based,... more
Annotation of RNA and protein-coding genes We validated 10,757 annotated protein genes through comparison of their intron-exon structure with G. gallus or C. japonica orthologs (Supplementary data file S1). To do so we BLASTed our... more
Plant tissues display major alterations upon the perception of microbial pathogens. Changes of cytoplasmic and apo-plastic components that sense and transduce plant defenses have been extensively characterized. In contrast, less... more
The kinetochore forms the site of attachment for mitotic spindle microtubules driving chromosome segregation. The interdependent protein interactions in this large structure have made it difficult to dissect the function of its... more
The micronucleus assay is frequently used for purposes of biological dosimetry. Due to high interindividual variability in the spontaneous frequency of micronuclei, its sensitivity in the low dose region is poor. It has been suggested... more
Character Transplant When engineering bacteria, it can be advantageous to propagate the genomes in yeast. However, to be truly useful, one must be able to transplant the bacterial chromosome from yeast back into a recipient bacterial... more
DNA methylation patterns of mammalian genomes are generated in gametogenesis and early embryonic development. Two de novo DNA methyltransferases, Dnmt3a and Dnmt3b, are responsible for the process. Both enzymes contain a long N-terminal... more
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